Structure of PDB 6lqs Chain A9

Receptor sequence
>6lqsA9 (length=128) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
NILSSHLEANSTEILDDLMSGSWTEPEIKKFILTKINTVDHLSKIFLTIS
KSITQNPWNEENLLPLWLKWLLTLKSGELNSIKDKHTKKNCKHLKSALRS
SEEILPVLLGIQGRLEMLRRQAKLREDL
3D structure
PDB6lqs Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
ChainA9
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A9 K480 S484 R487 K92 S96 R99
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0005515 protein binding
GO:0034511 U3 snoRNA binding
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006364 rRNA processing
GO:0030490 maturation of SSU-rRNA
GO:0042254 ribosome biogenesis
GO:0045943 positive regulation of transcription by RNA polymerase I
GO:0071528 tRNA re-export from nucleus
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0030686 90S preribosome
GO:0032040 small-subunit processome
GO:0033553 rDNA heterochromatin
GO:0034455 t-UTP complex
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6lqs, PDBe:6lqs, PDBj:6lqs
PDBsum6lqs
PubMed32943522
UniProtP38882|UTP9_YEAST U3 small nucleolar RNA-associated protein 9 (Gene Name=UTP9)

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