Structure of PDB 4v7k Chain A7
Receptor sequence
>4v7kA7 (length=47) Species:
300852
(Thermus thermophilus HB8) [
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MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPAVR
3D structure
PDB
4v7k
The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Chain
A7
Resolution
3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
A7
M1 K2 R3 T4 W5 Q6 P7 N8 R9 R10 K11 R12 A13 K14 H16 G17 F18 R19 R21 K29 V30 K32 R33 R34 R35 K37 G38 R39 W40 R41
M1 K2 R3 T4 W5 Q6 P7 N8 R9 R10 K11 R12 A13 K14 H16 G17 F18 R19 R21 K29 V30 K32 R33 R34 R35 K37 G38 R39 W40 R41
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4v7k
,
PDBe:4v7k
,
PDBj:4v7k
PDBsum
4v7k
PubMed
20005802
UniProt
P80340
|RL34_THET8 Large ribosomal subunit protein bL34 (Gene Name=rpmH)
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