Structure of PDB 8ove Chain A4

Receptor sequence
>8oveA4 (length=198) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
QPHLRKLRKLKRANPSQEEESVARVLFELEGSHKTLRAQLPRFHINTVRT
SSSPRHKKTAMIILYPLRFIMLVRKIQRTLTAELEKRFPGNIVVLVAQRK
ITKRPNDVYKLQQVQRSRTSVAVFENILNDLIYPCDVVGRRWRYRTDGSK
LMKVFLDARDRKRVESRLPLLAHVYKLLTHRTVTFGFMWNPKLQQVSS
3D structure
PDB8ove A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
ChainA4
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A4 R11 K12 L13 K14 R45 L70 R71 M74 L75 Q101 R102 K103 I104 R107 Y112 Q115 R119 S120 R121 T122 S123 V124 K179 H183 R8 K9 L10 K11 R42 L67 R68 M71 L72 Q98 R99 K100 I101 R104 Y109 Q112 R116 S117 R118 T119 S120 V121 K176 H180
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006364 rRNA processing
GO:0006412 translation
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0032040 small-subunit processome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ove, PDBe:8ove, PDBj:8ove
PDBsum8ove
PubMed37985661
UniProtQ38FD9

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