Structure of PDB 8ckb Chain A286

Receptor sequence

>8ckbA286 (length=333) Species: 2301731 (Bacteroides phage crAss001) [Search protein sequence]

MVISINQVRQLYVAKALKANTAALTTAGDIVPKADTAKTTLYFQSMSPAG
IVASDKINLKHVLYAKATPSEALAHKLVRYSVTLDADVSATPVAGQNYIL
RLAFRQYIGLSEEDQYFKYGEVIARSGMTASDFYKKMAISLAKNLENKTE
STPLVNIYLISAAAASTDVPVTSATKESDLTATDYNQIIIEETEQPWVLG
MMPQAFIPFTPQFLTITVDGEDRLWGVATVVTPTKTVPDGHLIADLEYFC
MGARGDIYRGMGYPNIIKTTYLVDPGAVYDVLDIHYFYTGSNESVQKSEK
TITLVAVDDGSHTAMNALIGAINTASGLTIATL

3D structure

PDB

8ckb Structural atlas of the most abundant human gut virus

Chain

A286

Resolution

4.39 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A286	N6 Q7 R9 Q10 L11 Y12 A14 L17 P69 S70 E71 I243 V278 Y279 D280 V281 L282 D283 I284 H285 Y286 F287 Y288 E293 S294 V295 Q296 K297 S298 E299 K300 T301 I302 T303 L304 V305 A306 V307 D308 D309 G310 S311 H312 T313 A314 M315 N316 A317 L318 I319 G320 T332 L333	N6 Q7 R9 Q10 L11 Y12 A14 L17 P69 S70 E71 I243 V278 Y279 D280 V281 L282 D283 I284 H285 Y286 F287 Y288 E293 S294 V295 Q296 K297 S298 E299 K300 T301 I302 T303 L304 V305 A306 V307 D308 D309 G310 S311 H312 T313 A314 M315 N316 A317 L318 I319 G320 T332 L333

Gene Ontology

	Cellular Component
GO:0019028	viral capsid
GO:0098021	viral capsid, decoration

View graph for
Cellular Component

External links

PDB	RCSB:8ckb, PDBe:8ckb, PDBj:8ckb
PDBsum	8ckb
PubMed
UniProt	A0A385DVS7\|AUXCP_BPCA1 Auxiliary capsid protein (Gene Name=crAss001_36)

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