Structure of PDB 6hiv Chain A2

Receptor sequence
>6hivA2 (length=449) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
SAAAFYEFVDNNFLNNKRPPVPGGSWTVEVLRNKSLADLQHIWFLLLKER
NMLKSMKEHYLRHQEELGAMPAPSRLKMIDESMRNIKRVVKERDEEATAR
AVEIFKERLKRGIYRYPPGPPPPPGAHDKTSVVKVELSCYVEEERLRELF
GRYDVFEPHKGIVRVELKLPDEVLKQKEEAEQLWTQYMAECSDVKAYHQW
STAAPSAYDYTEVELAPGIFANDAIEGVIVAARVPVPPPKEKQPPPKNPL
ERLKAERRSYLARTTIQLGYFPNVTLPPPRYETVEAVPRPVHPDEIEGPW
EAYITYDREDGLSYAQSLGITTIGVATVLGLTEHVREPQPYAVVDPVYCE
ALRRERAREETLMKWPHVPEWKYEYSTYTRKHLADIVQYNYTNVVDYVDR
EVLLTGKSVWECPIHIDHTCGGSKTVPPHAKKPVRYMDAGIANVGVTDI
3D structure
PDB6hiv Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
ChainA2
Resolution7.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A2 R70 H389 P391 W393 K394 Y395 Y400 R402 G443 K446 T447 K454 R457 Y458 I463 A464 R62 H367 P369 W371 K372 Y373 Y378 R380 G421 K424 T425 K432 R435 Y436 I441 A442
BS02 peptide A2 N24 R26 P81 Y419 V420 N16 R18 P73 Y397 V398
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005761 mitochondrial ribosome
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:0031981 nuclear lumen
GO:0097014 ciliary plasm
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6hiv, PDBe:6hiv, PDBj:6hiv
PDBsum6hiv
PubMed30213880
UniProtQ38EM7

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