Structure of PDB 8apd Chain A1

Receptor sequence
>8apdA1 (length=530) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
FFKTTEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIQIQVSPTTFAAGLV
FNLEKDGRIGIILMDNITEVQSGQKVMATGQLLHIPVGAGVLGKVVNPLG
HEVPVGSTLGKVDTGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELI
VGDRQTGKTSIAVSTIINQVRINQQILSKNAVISIYVSIGQRCSNVARIH
RLLQSYGALRYTTVMAATAAEPAGLQYLAPYAGVTMGEYFMNRGRHCLCV
YDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKG
GGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNI
GLSVSRVGSSAQNAAMKGVAGKLKGILAEYRKLAADSVGGQQVQTIPMIR
GARFVALFNQKQPSYFMNAIVSLYACLNGYLDDVKVQYVKFYEYLLVHRD
LGIMYGTAKNKFFYMYVQELNYLIRFFTLNSPILHGELEEMLKQHTHLFL
QHYQSKMNAIKSEKDVKALKNLLYSCKRAV
3D structure
PDB8apd An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases.
ChainA1
Resolution3.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP A1 Q209 G211 K212 T213 S214 F394 R399 Q155 G157 K158 T159 S160 F340 R345
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0032559 adenyl ribonucleotide binding
GO:0043531 ADP binding
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8apd, PDBe:8apd, PDBj:8apd
PDBsum8apd
PubMed36220811
UniProtQ9GS23|ATPA_TRYBB ATP synthase subunit alpha, mitochondrial (Gene Name=Tb427.07.7420)

[Back to BioLiP]