Structure of PDB 8ove Chain A0

Receptor sequence
>8oveA0 (length=218) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
MSRKEWYDVVAPKNFEVRQFAKTICNKTQGTKIAADFLRGRVYEGNLADL
NKNEDDAYRKVKFTVQEVQGRNLLTQFHGMDMTSDRVYYLLRKWCTTIEA
TVEAKTADGYGLRLFLIAFTKKQENQLSKNCYAKTRLVKWVRMRATNIIR
RRLAKLDINDAVSLLTRNILRDRLAKRCNPIIPLRDLRIRKVKVIRTPKF
DAQALIAAHGEVPTSAEG
3D structure
PDB8ove A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
ChainA0
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A0 L116 K118 W119 R138 Q148 N150 Q151 S153 K154 N155 Y157 K159 T160 W165 R167 M168 R169 N204 P205 K218 L91 K93 W94 R113 Q123 N125 Q126 S128 K129 N130 Y132 K134 T135 W140 R142 M143 R144 N179 P180 K193
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ove, PDBe:8ove, PDBj:8ove
PDBsum8ove
PubMed37985661
UniProtQ38BK6

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