Structure of PDB 9bnj Chain A

Receptor sequence
>9bnjA (length=459) Species: 585 (Proteus vulgaris) [Search protein sequence]
AKRIVEPFRIKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTD
SGTNAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNYDYIIPAHQGR
GAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVT
EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPV
SMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIF
DMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTY
GGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTG
GHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRQKH
ADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFATLKGLEFEYEPPVLR
HFTARLKPI
3D structure
PDB9bnj Proteus vulgaris tryptophan indole-lyase aminoacrylate complex with benzimidazole
ChainA
Resolution1.51 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 4.1.99.1: tryptophanase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BZI A F37 R101 F132 D133 V389 F459 F36 R100 F131 D132 V388 F452
BS02 0JO A T50 S52 Q99 G100 R101 F132 N194 D223 R226 S263 K266 R414 T49 S51 Q98 G99 R100 F131 N193 D222 R225 S262 K265 R407
BS03 BZI A Y160 Y348 Y159 Y347
Gene Ontology
Molecular Function
GO:0009034 tryptophanase activity
GO:0016829 lyase activity
Biological Process
GO:0006569 tryptophan catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:9bnj, PDBe:9bnj, PDBj:9bnj
PDBsum9bnj
PubMed
UniProtP28796|TNAA_PROVU Tryptophanase (Gene Name=tnaA)

[Back to BioLiP]