Structure of PDB 9b38 Chain A

Receptor sequence
>9b38A (length=679) Species: 10116 (Rattus norvegicus) [Search protein sequence]
HVLRFGGIFEYVESGPMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKI
NLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTR
WKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLI
RLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHE
MAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILN
TENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVA
VQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGL
RTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSL
IVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLV
EDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPF
MTLGISILYRKPNWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAK
QTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQ
RVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRD
KITIAILQLQEEGKLHMMKEKWWRGNGCP
3D structure
PDB9b38 Kainate receptor channel opening and gating mechanism
ChainA
Resolution3.36 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLU A Y488 P516 A518 R523 G688 A689 T690 M737 E738 Y764 Y455 P483 A485 R490 G562 A563 T564 M611 E612 Y638
BS02 MAN A D162 P407 D129 P374
External links
PDB RCSB:9b38, PDBe:9b38, PDBj:9b38
PDBsum9b38
PubMed38778115
UniProtP42260|GRIK2_RAT Glutamate receptor ionotropic, kainate 2 (Gene Name=Grik2)

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