Structure of PDB 9azo Chain A

Receptor sequence

>9azoA (length=315) Species: 285 (Comamonas testosteroni) [Search protein sequence]

KTIKVALAGAGAFGIKHLDGIKNIDGVEVVSLVGRRFDQTKEVADKYGIA
HVATDLAESLALPEVDAVILCTPTQMHAEQAIACMKAGKHVQVEIPLADA
LKDAQEVAELQKQTGLVAMVGHTRRFNPSHQWVHKKIEAGEFNIQQMDVQ
TYFFRRTNMNALGQARSWTDHLLWHHAAHTVDLFAYQAGSPIVKANAVQG
PIHKDLGIAMDMSIQLKAANGAICTLSLSFNNDGPLGTFFRYIGDTGTYL
ARYDDLYTGKDEKIDVSQVDVSMNGIELQDREFFAAIREGREPNSSVQQV
FNCYKVLHDLEQQLN

3D structure

PDB

9azo Characterization of lignin degrading enzyme PmdC, which catalyzes a key step in the synthesis of polymer precursor 2-pyrone-4,6-dicarboxylic acid (PDC).

Chain

Resolution

2.34 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	NAP	A	G11 G13 A14 F15 G36 R37 C73 T74 T76 H79 E96 I97 N162 R168 W170 H177 H181	G9 G11 A12 F13 G34 R35 C71 T72 T74 H77 E94 I95 N160 R166 W168 H175 H179

External links

PDB	RCSB:9azo, PDBe:9azo, PDBj:9azo
PDBsum	9azo
PubMed	39222681
UniProt	Q93PS4

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