Structure of PDB 8zrz Chain A

Receptor sequence

>8zrzA (length=516) Species: 1396 (Bacillus cereus) [Search protein sequence]

AVNGKGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDF
WWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCN
VPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFA
AAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAK
SKFRLWVLNKYGSLNEVNKAWGTKLISELAILPPSDGEQFLMNGYLSMYG
KDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTI
PHGAEKPAGYNDYSHLLDAFKSAKLDVTFTCLEMTDKGSYPEYSMPKTLV
QNIATLANEKGIVLNGENALSIGNEEEYKRVAEMAFNYNFAGFTLLRYQD
VMYNNSLMGKFKDLLGVTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWD
TKQYPIQLYYDSHSNDWRGNVVLPAERNIEFKAFIKSKDGTVKSWQTIQQ
SWNPVPLKTTSHTSSW

3D structure

PDB

8zrz Structural insight into sugar-binding modes of microbial beta-amylase.

Chain

Resolution

1.26 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	GLC	A	P234 Q239 F240 G244 Y249	P234 Q239 F240 G244 Y249
BS02	GLC	A	L225 A230 I231 L232 S235 Y249	L225 A230 I231 L232 S235 Y249
BS03	GLC	A	K482 W495	K482 W495
BS04	GLC	A	W449 Q499	W449 Q499
BS05	BGC	A	N33 W37	N33 W37
BS06	GLC	A	D236 Q239	D236 Q239
BS07	GLC	A	Y186 H292 L370	Y186 H292 L370
BS08	GLC	A	V95 E172 Y178 G290 W293 T330 C331	V95 E172 Y178 G290 W293 T330 C331
BS09	GLC	A	A170 E172 T330 E367 A369 L396	A170 E172 T330 E367 A369 L396
BS10	GLC	A	M16 D49 H89 D97 A170 R397	M16 D49 H89 D97 A170 R397
BS11	CA	A	E56 D60 Q61 E141 E144	E56 D60 Q61 E141 E144
BS12	BGC	A	W502 H512 T513	W502 H512 T513

External links

PDB	RCSB:8zrz, PDBe:8zrz, PDBj:8zrz
PDBsum	8zrz
PubMed
UniProt	P36924\|AMYB_BACCE Beta-amylase (Gene Name=spoII)

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