Structure of PDB 8ye4 Chain A

Receptor sequence

>8ye4A (length=274) Species: 9606 (Homo sapiens) [Search protein sequence]

GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFG
CDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAA
HVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRW

3D structure

PDB

8ye4 Structural insights into immune escape at killer T cell epitope by SARS-CoV-2 Spike Y453F variants.

Chain

Resolution

3.2 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	Y7 E63 K66 V67 H70 T73 N77 I80 Y84 L95 M97 F99 Y116 Y123 T143 W147 Q155 Q156 Y159 Y171	Y7 E63 K66 V67 H70 T73 N77 I80 Y84 L95 M97 F99 Y116 Y123 T143 W147 Q155 Q156 Y159 Y171

External links

PDB	RCSB:8ye4, PDBe:8ye4, PDBj:8ye4
PDBsum	8ye4
PubMed	39002680
UniProt	Q6IVJ7

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