Structure of PDB 8x46 Chain A

Receptor sequence
>8x46A (length=269) Species: 70601 (Pyrococcus horikoshii OT3) [Search protein sequence]
KMRDRLFFLLSKYGIRPRDSIGQHFLIIEDVIEKAIETANVNENDVILEV
GPGLGFLTDELAKRAKKVYTIEIDQKIIEILKKEYSWNNVKIIQGDAVRV
EWPKFNKVVSNIPYKISSPFTFKLLKTDFERAVVMYQLEFALRMVAKPGS
RNYSRLSLMAQALGNVEIVMKIGKGAFYPRPKVDSALVLIEPRKDKIVLN
ENLVKALFQHRRKTVPRALKDSIHMLGVSKDEIRGIINNVPHSNKRVFQL
YPEEVKDIEEYLKKHGIIS
3D structure
PDB8x46 Structural and functional characterization of archaeal DIMT1 unveils distinct protein dynamics essential for efficient catalysis.
ChainA
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SFG A I42 G43 H45 G72 G74 I92 E93 I94 D117 A118 N132 P134 Y135 I21 G22 H24 G51 G53 I71 E72 I73 D96 A97 N111 P113 Y114
BS02 ZN A D40 H45 D19 H24
BS03 ARG A R152 E188 L210 E212 R131 E167 L189 E191
External links
PDB RCSB:8x46, PDBe:8x46, PDBj:8x46
PDBsum8x46
PubMed39146930
UniProtO59487|RSMA_PYRHO Probable ribosomal RNA small subunit methyltransferase A (Gene Name=rsmA)

[Back to BioLiP]