Structure of PDB 8vxc Chain A

Receptor sequence
>8vxcA (length=1139) Species: 562 (Escherichia coli) [Search protein sequence]
MPATADEIIEAIKEASAVGFRGRLIARGQARSVIWRDGDLPPDAPEFSAL
LSQDLQGYAYALIDLGLRLRELNGDDAYARIAFEQAGTALESAIAKGKRD
SRDTDFHFVMAAASYHLAHLSARAYSLLAMVGQDDNFSPIERALTQLIRR
DLRTLRDNALGFRLRGDDLALTDAYMSAISLYLLAVERGESRLLSRAIEK
LRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFHERLPLVPVGGDAAE
WPALRELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTSAGK
TRIAELCILRCLAGGKRVVFITPLRALSAQTEATLSRTFGPLGKTISMLY
GSIGVSGMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHM
IGADEREVRYEVQIQRLLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRR
DKPGGPIKNNWRPTRLQFGEVIWSAPAGRLNLSVGYEAAWVSRFIVSRQP
PKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTVLIYCPLRRSVEPF
AETIVDLHQRGLLPSLFDAAPDILDTAISLGEEWLGAHSPILACLRLGVA
LHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHR
NRELIKVSEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDT
GAREMESGLIQLVCVLLIRMHTRLGGDLKALTEYVTNNAVAWEFPEIMTE
SPQERDIAQAIWEKQLSTLDTAILSLLGENDIPDDQIETALDDILQSSLW
QRSLQRYRDENERILLKSGLLSRSRYIWQRSTAAGRRGYFLSGVGLTTGL
RLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFYPFIPDPL
PGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVR
ATANGDLIGDTDTTLDDYELGFAVAAVETGTLSRSSSLLIQAGFSSRLAA
IKVVTDTTADFQSGQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGS
LSPKGSQVWSRHRYNGMVDWRDTPAVIGTPLQLYTVDGIHHVLADDGTPL
GSINGRINTNRRGLLRVEVDDENGRAMFDYLGPDDFIST
3D structure
PDB8vxc Hachiman is a genome integrity sensor
ChainA
Resolution2.93 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna A K555 R580 S581 P584 H681 S682 H684 R687 R724 K520 R545 S546 P549 H646 S647 H649 R652 R689
BS02 dna A P358 L359 R360 S387 T407 E409 R441 K544 R546 K548 R580 R595 P665 R685 Y973 P323 L324 R325 S352 T372 E374 R406 K509 R511 K513 R545 R560 P630 R650 Y938
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity

View graph for
Molecular Function
External links
PDB RCSB:8vxc, PDBe:8vxc, PDBj:8vxc
PDBsum8vxc
PubMed38464307
UniProtA0A426EXV0

[Back to BioLiP]