Structure of PDB 8viw Chain A

Receptor sequence

>8viwA (length=545) Species: 747 (Pasteurella multocida) [Search protein sequence]

TTSITDLYNEVAKSDLGLANPLVSIIMTSHNTAQFIEASINSLLLQTYKN
IEIIIVDDDSSDNTFEIASRIANTTSKVRVFRLNSNLGTYFAKNTGILKS
KGDIIFFQDSDDVCHHERIERCVNILLANKETIAVRCAYSRLAPETQHII
KVNNMDYRLGFITLGMHRKVFQEIGFFNCTTKGSDDEFFHRIAKYYGKEK
IKNLLLPLYYNTMRENSLFTDMVEWIDNHNIIQKMSDTRQHYATLFQAMH
NETASHDFKNLFQFPRIYDALPVPQEMSKLSNPKIPVYINICSIPSRIAQ
LRRIIGILKNQCDHFHIYLDGYVEIPDFIKNLGNKATVVHCKDKDNSIRD
NGKFILLEELIEKNQDGYYITCDDDIIYPSDYINTMIKKLNEYDDKAVIG
LHGILFPSRMTKYFSADRLVYSFYKPLEKDKAVNVLGTGTVSFRVSLFNQ
FSLSDFTHSGMADIYFSLLCKKNNILQICISRPANWLTEDNRDSETLYHQ
YRDNDEQQTQLIMENGPWGYSSIYPLVKNHPKFTDLIPCLPFYFL

3D structure

PDB

8viw Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin

Chain

Resolution

3.3 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	BDP	A	Y530 K531	Y424 K425
BS02	GNS	A	R524 Y604	R418 Y498
BS03	BDP	A	H508 R524	H402 R418
BS04	GNS	A	T181 S182	T75 S76
BS05	UDP	A	C398 I400 R403 D426 R455 D479 D480 D481 T602 L603 Y604	C292 I294 R297 D320 R349 D373 D374 D375 T496 L497 Y498
BS06	MN	A	D217 D218	D111 D112
BS07	UDP	A	T134 H136 D164 T195 D215 S216 D217 R247 S323 L324 F325 K385	T28 H30 D58 T89 D109 S110 D111 R141 S217 L218 F219 K279

External links

PDB	RCSB:8viw, PDBe:8viw, PDBj:8viw
PDBsum	8viw
PubMed
UniProt	Q5SGE1

[Back to BioLiP]