Structure of PDB 8v3q Chain A

Receptor sequence
>8v3qA (length=501) Species: 9606 (Homo sapiens) [Search protein sequence]
NELRCGGLLFSSRFDSGNLAHVEKVESPDYEFNVWTRPDCAETEFENGNR
SWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWERI
RDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQLD
QRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREP
RLEQLFPDTSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRP
DDPRAQTLRRLFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLKPDAVL
HPAIYGAKAVLLYHHVHSRLTIPPKESGVAYYVDLHGHASKRGCFMYGNS
FSDESTQVENMLYPKLISLNSAHFDFQGCNFSEKNMYARDRQSKEGSGRV
AIYKASGIIHSYTLACNYNTGRSVNSIPAACHDNGRASPPPPPAFPSRYT
VELFEQVGRAMAIAALDMAECNPWPRIVLSEHSSLTNLRAWMLKHVRNSR
G
3D structure
PDB8v3q Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
ChainA
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A K97 K100 Y302 H434 H436 A437 S438 K75 K78 Y280 H336 H338 A339 S340
BS02 ZN A H252 E255 H434 H230 E233 H336
BS03 GLU A N312 R313 Y445 K495 S498 R500 T514 N290 R291 Y347 K394 S397 R399 T413
External links
PDB RCSB:8v3q, PDBe:8v3q, PDBj:8v3q
PDBsum8v3q
PubMed39020174
UniProtQ8NDL9|CBPC5_HUMAN Cytosolic carboxypeptidase-like protein 5 (Gene Name=AGBL5)

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