Structure of PDB 8v3n Chain A

Receptor sequence
>8v3nA (length=489) Species: 9606 (Homo sapiens) [Search protein sequence]
ELRCGGLLFSSRFDSGNLAHVEKVESLSSPDYEFNVWTRPDCAETEFENG
NRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWE
RIRDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQ
LDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDR
EPRLEQLFPDTSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFIL
RPDDPRAQTLRRLFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLKPDA
VLHPAIYGAKAVLLYHHVSGSGVAYYVDLHGHASKRGCFMYGNSFSDEST
QVENMLYPKLISLNSAHFDFQGCNFSEKNMYARDRRDGQSKEGSGRVAIY
KASGIIHSYTLACNYNTGRSVNSIPAACHDNGRASSRYTVELFEQVGRAM
AIAALDMAECNPWPRIVLSEHSSLTNLRAWMLKHVRNSR
3D structure
PDB8v3n Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
ChainA
Resolution2.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A H252 E255 H434 H232 E235 H330
BS02 A1AAG A H252 Y302 R303 N312 R313 H434 G435 H436 A437 S438 Y445 K495 R500 T514 H232 Y282 R283 N292 R293 H330 G331 H332 A333 S334 Y341 K391 R396 T410
External links
PDB RCSB:8v3n, PDBe:8v3n, PDBj:8v3n
PDBsum8v3n
PubMed39020174
UniProtQ8NDL9|CBPC5_HUMAN Cytosolic carboxypeptidase-like protein 5 (Gene Name=AGBL5)

[Back to BioLiP]