Structure of PDB 8uv0 Chain A
Receptor sequence
>8uv0A (length=279) Species:
9606
(Homo sapiens) [
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ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLVPSTAIREISLLKE
LNHPNIVKLLDVIHTELYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF
QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVTLWYR
APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL
GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHY
DPNKRISAKAALAHPFFQDVTKPVPHLRL
3D structure
PDB
8uv0
Discovery of (4-Pyrazolyl)-2-aminopyrimidines as Potent and Selective Inhibitors of Cyclin-Dependent Kinase 2.
Chain
A
Resolution
1.55 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
2.7.11.22
: cyclin-dependent kinase.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
XKU
A
I10 V18 A31 F80 E81 L83 D86 K89 L134 D145
I9 V17 A30 F71 E72 L74 D77 K80 L125 D136
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0004672
protein kinase activity
GO:0004674
protein serine/threonine kinase activity
GO:0004693
cyclin-dependent protein serine/threonine kinase activity
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0016301
kinase activity
GO:0019904
protein domain specific binding
GO:0030332
cyclin binding
GO:0035173
histone kinase activity
GO:0046872
metal ion binding
GO:0097472
cyclin-dependent protein kinase activity
GO:0106310
protein serine kinase activity
Biological Process
GO:0000082
G1/S transition of mitotic cell cycle
GO:0000086
G2/M transition of mitotic cell cycle
GO:0000122
negative regulation of transcription by RNA polymerase II
GO:0006260
DNA replication
GO:0006281
DNA repair
GO:0006338
chromatin remodeling
GO:0006351
DNA-templated transcription
GO:0006468
protein phosphorylation
GO:0006813
potassium ion transport
GO:0007099
centriole replication
GO:0007165
signal transduction
GO:0007265
Ras protein signal transduction
GO:0007346
regulation of mitotic cell cycle
GO:0008284
positive regulation of cell population proliferation
GO:0010389
regulation of G2/M transition of mitotic cell cycle
GO:0010468
regulation of gene expression
GO:0016310
phosphorylation
GO:0018105
peptidyl-serine phosphorylation
GO:0031453
positive regulation of heterochromatin formation
GO:0031571
mitotic G1 DNA damage checkpoint signaling
GO:0032298
positive regulation of DNA-templated DNA replication initiation
GO:0043247
telomere maintenance in response to DNA damage
GO:0043687
post-translational protein modification
GO:0045740
positive regulation of DNA replication
GO:0045893
positive regulation of DNA-templated transcription
GO:0051298
centrosome duplication
GO:0051301
cell division
GO:0051321
meiotic cell cycle
GO:0071732
cellular response to nitric oxide
GO:0090398
cellular senescence
GO:1905784
regulation of anaphase-promoting complex-dependent catabolic process
Cellular Component
GO:0000307
cyclin-dependent protein kinase holoenzyme complex
GO:0000781
chromosome, telomeric region
GO:0000793
condensed chromosome
GO:0000805
X chromosome
GO:0000806
Y chromosome
GO:0001673
male germ cell nucleus
GO:0005634
nucleus
GO:0005635
nuclear envelope
GO:0005654
nucleoplasm
GO:0005667
transcription regulator complex
GO:0005737
cytoplasm
GO:0005768
endosome
GO:0005813
centrosome
GO:0005829
cytosol
GO:0005856
cytoskeleton
GO:0015030
Cajal body
GO:0097123
cyclin A1-CDK2 complex
GO:0097124
cyclin A2-CDK2 complex
GO:0097134
cyclin E1-CDK2 complex
GO:0097135
cyclin E2-CDK2 complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8uv0
,
PDBe:8uv0
,
PDBj:8uv0
PDBsum
8uv0
PubMed
38325398
UniProt
P24941
|CDK2_HUMAN Cyclin-dependent kinase 2 (Gene Name=CDK2)
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