Structure of PDB 8uuw Chain A

Receptor sequence
>8uuwA (length=296) Species: 2697049 (Severe acute respiratory syndrome coronavirus 2) [Search protein sequence]
FTTVDNINLHTQVSMTYGQQFGPTYLDGADVTKIKPHNSHEKTFYVLPND
DTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNC
YLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGE
LGDVRETMSYLFQHANLDSCKRVLNVVQQQTTLKGVEAVMYMGTLSYEQF
KKGVQIPCTCGATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNY
QCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTI
3D structure
PDB8uuw Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model
ChainA
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.1.1.56: mRNA (guanine-N(7))-methyltransferase.
2.1.1.57: methyltransferase cap1.
2.7.7.48: RNA-directed RNA polymerase.
2.7.7.50: mRNA guanylyltransferase.
3.1.13.-
3.4.19.12: ubiquitinyl hydrolase 1.
3.4.22.-
3.4.22.69: SARS coronavirus main proteinase.
3.6.4.12: DNA helicase.
3.6.4.13: RNA helicase.
4.6.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 Y2N A L162 G163 D164 E167 P248 Y264 G266 N267 Y268 Q269 Y273 L151 G152 D153 E156 P230 Y246 G248 N249 Y250 Q251 Y255
BS02 ZN A H89 D108 H78 D97
BS03 ZN A W106 C111 H272 W95 C100 H254
Gene Ontology
Molecular Function
GO:0008234 cysteine-type peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:8uuw, PDBe:8uuw, PDBj:8uuw
PDBsum8uuw
PubMed38547259
UniProtP0DTD1|R1AB_SARS2 Replicase polyprotein 1ab (Gene Name=rep)

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