Structure of PDB 8um0 Chain A

Receptor sequence
>8um0A (length=363) Species: 195103 (Clostridium perfringens ATCC 13124) [Search protein sequence]
PLILFNKDNNIWNSKYFRIPNIQLLNDGTILTFSDIRYNGPDNHAYIDIA
SARSTDFGKTWSYDIAMKNNRIDSTYSRVMDSTTVITNTGRIILIAGSWN
TNGNWAMTTSTRRSDWSVQMIYSDDNGLTWSNKIDLTKDSSKVKNQPSNT
IGWLGGVGSGIVMDDGTIVMPAQISLRENNENNYYSLIIYSKDNGETWTM
GNKVPNSNTSENMVIELDGALIMSTRYDYSGYRAAYISHDLGSTWEIYEP
LNGKVLTGKGSGCQGSFIKATTSNGHRIGLISAPKNTKGEYIRDNIAVYM
IDFDDLSKRVQEICIPYPKDGNKLGGGYSCLSFKNSHLSIVYEANGNIEY
QDLTPYYSLINKQ
3D structure
PDB8um0 A "terminal" case of glycan catabolism: structural and enzymatic characterization of the sialidases of Clostridium perfringens.
ChainA
Resolution2.46 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GAL A N62 Y310 K342 L343 G344 N43 Y291 K323 L324 G325
BS02 X1F A R37 N62 M99 N123 W124 Y203 R245 R312 Y347 R18 N43 M80 N104 W105 Y184 R226 R293 Y328
External links