Structure of PDB 8uiw Chain A

Receptor sequence
>8uiwA (length=225) Species: 10090 (Mus musculus) [Search protein sequence]
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVAS
ISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQG
YRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT
QTYICNVNHKPSNTKVDKKVEPKSC
3D structure
PDB8uiw Structural basis for promiscuity in ligand recognition by yjdF riboswitch
ChainA
Resolution2.77 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna A Y34 Y57 S58 S60 Y62 Q102 Y104 R105 R106 R110 Y31 Y54 S55 S57 Y59 Q99 Y101 R102 R103 R107
External links