Structure of PDB 8uch Chain A

Receptor sequence
>8uchA (length=380) Species: 1343739 (Palaeococcus pacificus DY20341) [Search protein sequence]
MVSSYFKGILLNLGLDEERIEVLENKGGIVEDEFEGMRYLRLKDSARSLR
RGTVVFDEHNIILGFPHIKRVVQLENGIRRAFKRKPFYVEEAVDGYNVRV
AKIGEKILVFTRGGFVCPFTTERIEDFITLDFFKDYPNMVLCGEMAGPES
PYLVEGPPYVKEDIQFFLFDIQEKKTGRSLPVEERLKLAEEYGIPSVEVF
GLYDLSRIDELHALIDRLTKEKREGIVMKSPDMKKIVKYVTPYANINDIK
IGARIFFDLPHGYFMQRIKRLAFYLAERKIRGEEFDEYARALGKVLLEPF
VESIWDISSGDDEIAELFTVRVKKLETAHKMVTHFERLRLKIHIDDIEVL
DNGYWRITFKRVYPDATKEMRELWNGHAFV
3D structure
PDB8uch Characterisation and Engineering of a Thermophilic RNA Ligase from Palaeococcus pacificus
ChainA
Resolution2.14 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.5.1.3: RNA ligase (ATP).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP A V93 N97 E144 F169 V227 K229 K238 V93 N97 E144 F169 V227 K229 K238
BS02 MG A D94 E155 D248 D94 E155 D248
BS03 MG A D306 S309 D312 D306 S309 D312
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8uch, PDBe:8uch, PDBj:8uch
PDBsum8uch
PubMed38421610
UniProtA0A075LQ94

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