Structure of PDB 8spo Chain A

Receptor sequence
>8spoA (length=407) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence]
RNKIFISHATPDDNDFTRWLALKLIGLGYEVWCDILFLDKGVDFWSNIEK
VIREDTCKFLLVSSSYSNQREGVLKELAVAAKVKKQLKDDKFIIPLAIDE
QLSYDDINIDIVRLNAIDFKMSWARGLKDILEAFEKQKVPKEVADASKSN
LLYQQIFLHDKSVIEKEEIYDSNWLSILSFPEELRFHEYNWMLPKRFDVR
ELTFPAVRYKNYLCTFAWAYDFTYHLPKTETYHKSKTIRIPTEEILSGSY
DSNFIRNAECKRLIVQLLNKAFELRMKDKEVQEYEMSNKTAYWLEMLVGK
QKDKNWHFAISGASKLYPFPVLMISSHIFFTADGKKLIDSSSVQHSSRRR
QGKNWWNNTWRTKLLAFIKYLSDDDTSFYLEMGSEEKVFVSNEPVKFKGN
VSYNIPE
3D structure
PDB8spo Oligomerization-mediated activation of a short prokaryotic Argonaute.
ChainA
Resolution2.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A K211 E260 R263 M287 S288 H358 R362 K210 E259 R262 M286 S287 H345 R349
BS02 dna A R201 R263 K328 H358 R362 R200 R262 K315 H345 R349
BS03 NAD A Y105 N116 Y104 N115
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8spo, PDBe:8spo, PDBj:8spo
PDBsum8spo
PubMed37494956
UniProtA0A316E683

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