Structure of PDB 8soq Chain A

Receptor sequence
>8soqA (length=203) Species: 220668 (Lactiplantibacillus plantarum WCFS1) [Search protein sequence]
RRNGFPEVIYGAGKTATQIVGIVQALSQQTLPILTTRLSAEKFAALQPAL
PTAVYHATAQCMTVGEQPAPKTPGYIAVVTAGTADQPVAEEAAVTAETFG
NRVERVYDVGVAGIHRLFAKLDVIRGARVVIVIAGMEGALASVVGGLVDK
PVIAVPTSVGYGTSFQGMTALLTMLNSCASGITVVNIDNGFGAAYSASMV
NQM
3D structure
PDB8soq Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis.
ChainA
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.143: pyridinium-3,5-biscarboxylic acid mononucleotide synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A G188 V191 G145 V148
BS02 DND A A124 G125 T126 D128 D151 G153 V154 G178 M179 V202 Y204 A81 G82 T83 D85 D108 G110 V111 G135 M136 V159 Y161
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016787 hydrolase activity
Biological Process
GO:0006189 'de novo' IMP biosynthetic process
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8soq, PDBe:8soq, PDBj:8soq
PDBsum8soq
PubMed37831946
UniProtF9UST0|LARB_LACPL Pyridinium-3,5-biscarboxylic acid mononucleotide synthase (Gene Name=larB)

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