Structure of PDB 8slh Chain A

Receptor sequence
>8slhA (length=362) Species: 1078020 (Mycolicibacterium thermoresistibile ATCC 19527) [Search protein sequence]
ASIIDTVANLAKRRGFVYQSGEITRSAWDYGPLGVELKENIKRQWWKSMV
TAREDVVGIDTSIILPREVWVASGLHRPETAQGIFTNFANVVTTARKKPP
FGIAQTGKSFPGNFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWY
VDLGIDRDNLRLYEHPPEKLSHYAERTVDIEYKYGFAGDPWGELEGIANR
TDFDLSTHSKHSGVDLSYYDQATDTRYVPYVIEPAAGLTRSLMAFLIDAY
SEDVDKRTVLRFDPRLAPVKVAVLPLSRHADLSPKARDLAAELRQHWNVE
FDDAGAIGRRYRRQDEVGTPYCVTVDFDSLEDNAVTVRERDSMAQERISI
DQVTDYLAVRLK
3D structure
PDB8slh Crystal Structure of Glycine tRNA ligase from Mycobacterium thermoresistibile (AMP bound, hexagonal form)
ChainA
Resolution3.05 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 6.1.1.14: glycine--tRNA ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP A F205 R206 T207 F210 E282 L283 G326 R329 F116 R117 T118 F121 E193 L194 G237 R240
BS02 MG A V54 R57 V50 R53
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004820 glycine-tRNA ligase activity
GO:0005524 ATP binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0006418 tRNA aminoacylation for protein translation
GO:0006426 glycyl-tRNA aminoacylation
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8slh, PDBe:8slh, PDBj:8slh
PDBsum8slh
PubMed
UniProtG7CIG9

[Back to BioLiP]