Structure of PDB 8sgm Chain A

Receptor sequence
>8sgmA (length=271) Species: 9606 (Homo sapiens) [Search protein sequence]
RLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQ
GTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYLELQVSAGCEVHP
GNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRE
TVQWLLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVC
HVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWYLRATLDVVAGEA
AGLSCRVKHSSLEGQDIVLYQ
3D structure
PDB8sgm Semi-invariant human type II Natural Killer T cells recognise CD1d independently of bound lipids.
ChainA
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 A1AHF A Q14 L29 W40 F70 Y73 S76 D80 F114 D151 W153 T154 F169 Q9 L24 W35 F65 Y68 S71 D75 F108 D145 W147 T148 F163
External links
PDB RCSB:8sgm, PDBe:8sgm, PDBj:8sgm
PDBsum8sgm
PubMed
UniProtP15813|CD1D_HUMAN Antigen-presenting glycoprotein CD1d (Gene Name=CD1D)

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