Structure of PDB 8qlv Chain A

Receptor sequence
>8qlvA (length=621) Species: 1313 (Streptococcus pneumoniae) [Search protein sequence]
SKTYNYVYSSDPSSLNYLAENRAATSDIVANLVDGLLENDQYGNIIPSLA
EDWTVSQDGLTYTYKLRKDAKWFTSEGEEYAPVTAQDFVTGLQYAADKKS
EALYLVQDSVAGLDDYITGKTSDFSTVGVKALDDQTVQYTLVKPELYWNS
KTLATILFPVNADFLKSKGDDFGKADPSSILYNGPFLMKALVSKSAIEYK
KNPNYWDAKNVFVDDVKLTYYDGSDQESLERNFTAGAYTTARLFPNSSSY
EGIKEKYKNNIIYSMQNSTSYFFNFNLDRKSYNYTSKTSDIEKKSTQEAV
LNKNFRQAINFAFDRTSYGAQSEGKEGATKILRNLVVPPNFVSIKGKDFG
EVVASKMVNYGKEWQGINFADGQDPYYNPEKAKAKFAEAKKELEAKGVQF
PIHLDKTVEVTDKVGIQGVSSIKQSIESVLGSDNVVIDIQQLTSDEFDSS
GYFAQTAAQKDYDLYHGGWGPDYQDPSTYLDIFNTNSGGFLQNLGLEPGE
ANDKAKAVGLDVYTQMLEEANKEQDPAKRYEKYADIQAWLIDSSLVLPSV
SRGGTPSLRRTVPFAAAYGLTGTKGVESYKYLKVQDKIVTTDEYAKAREK
WLKEKEESNKKAQEELAKHVK
3D structure
PDB8qlv Crystal structure of the pneumococcal Substrate-binding protein AliB in complex with Peptide 4
ChainA
Resolution1.49 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y37 N52 R53 A54 Y252 L260 Y302 Y483 G499 W500 G501 D503 F521 N524 V607 S609 Y610 L613 Y6 N21 R22 A23 Y221 L229 Y271 Y452 G468 W469 G470 D472 F490 N493 V576 S578 Y579 L582
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015031 protein transport
GO:0015833 peptide transport
Cellular Component
GO:0005886 plasma membrane
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8qlv, PDBe:8qlv, PDBj:8qlv
PDBsum8qlv
PubMed38838057
UniProtP0A4G1|ALIB_STRR6 Oligopeptide-binding protein AliB (Gene Name=aliB)

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