Structure of PDB 8qf8 Chain A

Receptor sequence
>8qf8A (length=776) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence]
NHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTP
KAPSYTNWENTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHR
AQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKWVPLYNIHKTYA
GLRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNE
TFADVAEITGDKKYLKLARRFSHKVILDPLIKNEDRLNGMHANTQIPKVI
GYKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHFH
PSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDY
YERALYNHILSSQEPDKGGFVYFTPMRPGHYRVYSQPETSMWCCVGSGLE
NHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTL
RIDKAAKKNLTLMIRIPEWAYEITINGKKHLSDIQTGASTYLPIRRKWKK
GDMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLATSTGTENLDGIYADDS
RGGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQ
KSKSLELIPFFRLHNSRYAVYFRQASEEQFKTIQEEMATAERKATELANR
TVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNLKIKEEA
SQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLK
VGSCEILFKPDGTEWTSAVYEVRLLK
3D structure
PDB8qf8 beta-l- Arabino furano-cyclitol Aziridines Are Covalent Broad-Spectrum Inhibitors and Activity-Based Probes for Retaining beta-l-Arabinofuranosidases.
ChainA
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UI5 A W79 Y164 E215 H262 N264 E337 C414 W58 Y143 E194 H241 N243 E316 C393
BS02 ZN A E337 C339 C414 C415 E316 C318 C393 C394
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8qf8, PDBe:8qf8, PDBj:8qf8
PDBsum8qf8
PubMed38051515
UniProtA0A6I0SRL5

[Back to BioLiP]