Structure of PDB 8pgj Chain A

Receptor sequence

>8pgjA (length=232) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]

SGEYPTVNEIPVGEVRLYQIADGVWSHIATQSFDGAVYPSNGLIVRDGDE
LLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAA
GVATYASPSTRRLAEAEGNEIPTHSLEGLSSSGDAVRFGPVELFYPGAAH
STDNLVVYVPSANVLYGGCAVHELSSTSAGNVADADLAEWPTSVERIQKH
YPEAEVVIPGHGLPGGLDLLQHTANVVKAHKN

3D structure

PDB

8pgj Crystal structure of the metallo-beta-lactamase VIM1 with 2985

Chain

Resolution

1.2 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	ZN	A	H114 H116 H179	H85 H87 H150
BS02	ZN	A	D118 C198 H240	D89 C169 H211
BS03	YMB	A	F62 Y67 W87 H116 D118 E146 H179 C198 H201 S205 S207 G209 N210 A212 D213 H240	F33 Y38 W58 H87 D89 E117 H150 C169 H172 S176 S178 G180 N181 A183 D184 H211

External links

PDB	RCSB:8pgj, PDBe:8pgj, PDBj:8pgj
PDBsum	8pgj
PubMed
UniProt	Q9XAY4

[Back to BioLiP]