Structure of PDB 8ped Chain A

Receptor sequence
>8pedA (length=230) Species: 179392 (Paradendryphiella salina) [Search protein sequence]
FLTAVSSIDTFLPVLNEAKLQWPTSALAASSEELLGGYVGSQFYLQDGKY
MQFQIAGSSNRCELRQMIPDGGSEIGWAVDDGTTHTATSSIVVPEQVDGV
EEVTIMQIHSGEAPQLRISWIRSKSLDGVAYEDFIMSTVRIGTGDSSDNF
VKTHLADRTAGAMSFQIDVKDSKLTITVNGNVVVNGQDLSFWDGTDSCYF
KAGAYNNNPTSESATARIKFAALAWVDHHH
3D structure
PDB8ped Crystal structure of Paradendryphiella salina PL7C alginate lyase soaked with trimannuronic acid
ChainA
Resolution1.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LGU A K34 S40 R80 K19 S25 R65
BS02 BEM A Q36 S40 H124 Y214 K216 Q21 S25 H109 Y199 K201
BS03 MAV A R132 R155 Y220 R117 R140 Y205
BS04 BEM A F165 K167 F150 K152
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:8ped, PDBe:8ped, PDBj:8ped
PDBsum8ped
PubMed
UniProtA0A7I9C8Z1

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