Structure of PDB 8p9x Chain A

Receptor sequence
>8p9xA (length=239) Species: 7955 (Danio rerio) [Search protein sequence]
MLSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVRRLSMLPHLADLVSY
SIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSW
SCGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAI
CLLSPDRPGVQDHVRIEALQDRLCDVLQAYIRIQHPGGRLLYAKMIQKLA
DLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
3D structure
PDB8p9x A vitamin D-based strategy overcomes chemoresistance in prostate cancer.
ChainA
Resolution2.15 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A I270 K274 R280 I288 K292 P442 E446 V452 S453 I56 K60 R66 I74 K78 P228 E232 V238 S239
BS02 FO6 A Y175 S265 R302 S303 S306 W314 C316 V328 H333 H423 Y21 S51 R88 S89 S92 W100 C102 V114 H119 H209
External links
PDB RCSB:8p9x, PDBe:8p9x, PDBj:8p9x
PDBsum8p9x
PubMed38982588
UniProtQ9PTN2|VDRA_DANRE Vitamin D3 receptor A (Gene Name=vdra)

[Back to BioLiP]