Structure of PDB 8p4x Chain A

Receptor sequence
>8p4xA (length=526) Species: 6359 (Platynereis dumerilii) [Search protein sequence]
EHVSLHWFRHGLRLHDNPALLKSLEGAKEFYALFIWDGEVAGTKLVSYPR
MKFLLECLKDLDDSLKKHGGRLYVVKGPSDVVIKQLIEEWGVTRVTCEID
PEPIWQPRDKAVKDLCATKGVKWFDYNSHLLWDPKAVCDANGGRPPHTYK
LFCQVTDLLGKPETPHPDPDFSHVQMPVSDDFDDKFGLPTLKELGCEPEC
EEQEKPFNKWQGGETGALELLETRLMIERTAYKAGYIMPNQYIPDLVGPP
RSMSPHLRFGALSIRKFYWDLHNNYAEVCGGEWLGALTAQLVWREYFYCM
SYGNPSFDKMEGNPICLQIPWYKDEEALEKWKQGQTGFPWIDACMRQLRY
EGWMHHVGRHAVACFLTRGDLWISWVDGLEAFYKYMLDGDWSVCAGNWMW
VSSSAFENCLQCPQCFSPVLYGMRMDPTGEFTRRYVPQLKNMPLKYLFQP
WKAPKEVQEKAGCVIGEDYPSPMVDHKEASSKCRRMMEDVKSIIKDPEVW
HCTPSDTNEVRKFCWLPEHMTADQPC
3D structure
PDB8p4x A marine cryptochrome with an inverse photo-oligomerization mechanism
ChainA
Resolution2.57 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A Q320 H386 R389 D418 D420 N427 Q290 H356 R359 D388 D390 N397
BS02 MG A S282 M283 S252 M253
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0071949 FAD binding
Biological Process
GO:0032922 circadian regulation of gene expression
GO:0043153 entrainment of circadian clock by photoperiod
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0048471 perinuclear region of cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8p4x, PDBe:8p4x, PDBj:8p4x
PDBsum8p4x
PubMed37903809
UniProtG8Z9G7

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