Structure of PDB 8ozd Chain A

Receptor sequence
>8ozdA (length=418) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence]
MRNKIFISHATPDDNDFTRWLALKLIGLGYEVWCDILFLDKGVDFWSNIE
KVIREDTCKFLLVSSSYSNQREGVLKELAVAAKVKKQLKDDKFIIPLAID
EQLSYDDINIDIVRLNAIDFKMSWARGLKDILEAFEKQKVPKEVADASKS
NLLYQQIFLHDKSVIEKEEIYDSNWLSILSFPEELRFHEYNWMLPKRFDV
RELTFPAVRYKNYLCTFAWAYDFTYHLPKTETYHKSKTIRIPTEEILSGS
YDSNFIRNAECKRLIVQLLNKAFELRMKDKEVQEYEMSNKTAYWLEKGKL
EKDKFEKTMLVGKQKDKNWHFAISGASKLYPFPVLMISSHIFFTADGKKL
IDSSSVQHSSRRRQGKNWWNNTWRTKLLAFIKYLSDDDTSFYLEMGSEEK
VFVSNEPVKFKGNVSYNI
3D structure
PDB8ozd Activation mechanism of a short argonaute-TIR prokaryotic immune system.
ChainA
Resolution3.89 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A Y210 K211 E260 M287 H340 S354 R361 Y210 K211 E260 M287 H340 S354 R361
BS02 dna A R201 R263 Q267 K328 H358 R362 K366 R201 R263 Q267 K328 H358 R362 K366
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8ozd, PDBe:8ozd, PDBj:8ozd
PDBsum8ozd
PubMed37467330
UniProtA0A316E683

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