Structure of PDB 8ox5 Chain A
Receptor sequence
>8ox5A (length=869) Species:
9606
(Homo sapiens) [
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TFIPMNLFEQFKRAANLYFLALLILQAVPQISTLAWYTTLVPLLVVLGVT
AIKDLVDDVARHKMDKEINFKRTKIDYLMNYMVYTIFVVLILLSAGLAIG
HAYWEAQVGNSSWYLYDGEDDTPSYRGFLIFWGYIIVLNTMVPISLYVSV
EVIRLGQSHFINWDLQMYYAEKDTPAKARTTTLNEQLGQIHYIFSDKTGT
LTQNIMTFKKCCINGQIYGDHRDVDFSWNTYADGKLAFYDHYLIEQIQSG
KEPEVRQFFFLLAVCHTVMVDRTDGQLNYQAASPDEGALVNAARNFGFAF
LARTQNTITISELGTERTYNVLAILDFNSDRKRMSIIVRTPEGNIKLYCK
GADTVIYERLHRMNPTKQETQDALDIFANETLRTLCLCYKEIEEKEFTEW
NKKFMAASVASTNRDEALDKVYEEIEKDLILLGATAIEDKLQDGVPETIS
KLAKADIKIWVLTGDKKETAENIGFACELLTEDTTICYGEDINSLLHARM
ENQRGNRALIITGSWLNEILLEQSKRRLEAKKEQRQKNFVDLACECSAVI
CCRVTPKQKAMVVDLVKRYKKAITLAIGDGANDVNMIKTAHIGVGISGQE
GMQAVMSSDYSFAQFRYLQRLLLVHGRWSYIRMCKFLRYFFYKNFAFTLV
HFWYSFFNGYSAQTAYEDWFITLYNVLYTSLPVLLMGLLDQDVSDKLSLR
FPGLYIVGQRDLLFNYKRFFVSLLHGVLTSMILFFIPLGAYLQTVGQDGE
APSDYQSFAVTIASALVITVNFQIGLDTSYWTFVNAFSIFGSIALYFGIM
FDFHSAGIHVLFPSAFQFTGTASNALRQPYIWLTIILTVAVCLLPVVAIR
FLSMTIWPSESDKIQKHRK
3D structure
PDB
8ox5
Activation and substrate specificity of the human P4-ATPase ATP8B1.
Chain
A
Resolution
2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
7.6.2.1
: P-type phospholipid transporter.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
ADP
A
S552 D554 E555 K601 G620 A621 L654 N896 E914
S283 D285 E286 K332 G351 A352 L385 N582 E600
BS02
ALF
A
D454 T456 N896
D196 T198 N582
BS03
MG
A
D454 T456 D893 E914
D196 T198 D579 E600
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0000287
magnesium ion binding
GO:0005215
transporter activity
GO:0005319
lipid transporter activity
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0015247
aminophospholipid flippase activity
GO:0016887
ATP hydrolysis activity
GO:0046872
metal ion binding
GO:0090554
phosphatidylcholine floppase activity
GO:0090556
phosphatidylserine floppase activity
GO:0140326
ATPase-coupled intramembrane lipid transporter activity
GO:0140345
phosphatidylcholine flippase activity
GO:0140346
phosphatidylserine flippase activity
GO:1901612
cardiolipin binding
Biological Process
GO:0006855
xenobiotic transmembrane transport
GO:0006869
lipid transport
GO:0007030
Golgi organization
GO:0007605
sensory perception of sound
GO:0008206
bile acid metabolic process
GO:0015711
organic anion transport
GO:0015721
bile acid and bile salt transport
GO:0015914
phospholipid transport
GO:0015917
aminophospholipid transport
GO:0021650
vestibulocochlear nerve formation
GO:0032534
regulation of microvillus assembly
GO:0034220
monoatomic ion transmembrane transport
GO:0045176
apical protein localization
GO:0045332
phospholipid translocation
GO:0045892
negative regulation of DNA-templated transcription
GO:0060119
inner ear receptor cell development
GO:0140331
aminophospholipid translocation
GO:1903729
regulation of plasma membrane organization
GO:2001225
regulation of chloride transport
Cellular Component
GO:0005654
nucleoplasm
GO:0005783
endoplasmic reticulum
GO:0005794
Golgi apparatus
GO:0005802
trans-Golgi network
GO:0005829
cytosol
GO:0005886
plasma membrane
GO:0012505
endomembrane system
GO:0016020
membrane
GO:0016324
apical plasma membrane
GO:0016604
nuclear body
GO:0032420
stereocilium
GO:0042995
cell projection
GO:1990531
phospholipid-translocating ATPase complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8ox5
,
PDBe:8ox5
,
PDBj:8ox5
PDBsum
8ox5
PubMed
37980352
UniProt
O43520
|AT8B1_HUMAN Phospholipid-transporting ATPase IC (Gene Name=ATP8B1)
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