Structure of PDB 8k27 Chain A

Receptor sequence

>8k27A (length=173) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence]

IKEMIEDFISKGGLIFTHSGRYTNTNNSCFIFNKNDIGVDTKVDMYTPKS
AGIKNEEGENLWQVLNKANMFYRIYSGELGEELQYLLKSCCTAKEDVTTL
PQIYFKNGEGYDILVPIGNAHNLISGTEYLWEHKYYNTFTQKLGGSNPQN
CTHACNKMRGGFKQFNCTPPQVE

3D structure

PDB

8k27 Structure of csy complex with short DNA

Chain

Resolution

3.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	A	P102 Q103 I104 Y105 Y112 P117	P101 Q102 I103 Y104 Y111 P116
BS02	dna	A	T26 N27 K50 S147 N148	T25 N26 K49 S146 N147
BS03	dna	A	K50 S51 W132 Y137 Q150 N157 K158 R160 G161	K49 S50 W131 Y136 Q149 N156 K157 R159 G160

External links

PDB	RCSB:8k27, PDBe:8k27, PDBj:8k27
PDBsum	8k27
PubMed
UniProt	F1D5V8

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