Structure of PDB 8jm4 Chain A

Receptor sequence
>8jm4A (length=514) Species: 3755 (Prunus dulcis) [Search protein sequence]
HHHLANTSAHDFSYLKFVYNATDTSLEGSYDYIVIGGGTSGCPLAATLSE
KYKVLLLERGTIATEYPNTLTADGFAYNLQQQDDGKTPVERFVSEDGIDN
VRARILGGTTIINAGVYARANISFYSQTGIEWDLDLVNKTYEWVEDAIVV
KPNNQSWQSVIGEGFLEAGILPDNGFSLDHEAGTRLTGSTFDNNGTRHAA
DELLNKGDPNNLLVAVQASVEKILFSLSAIGVIYTDSDGNSHQAFVRGNG
EVIVSAGTIGTPQLLLLSGVGPESYLSSLNITVVQPNPYVGQFVYDNPRN
FINILPPNPIEASVVTVLGIRSDYYQVSASSLPFSTPPFSLFPTTSYPLP
NSTFAHIVSQVPGPLSHGSVTLNSSSDVRIAPNIKFNYYSNSTDLANCVS
GMKKLGDLLRTKALEPYKARDVLGIDGFNYLGVPLPDDASFETFCLDNVA
SYWHYHGGSLVGKVLDDSFRVMGIKALRVVDASTFPYEPNSHPQGFYLML
GRYVGLQILQERSI
3D structure
PDB8jm4 Endo-deglycosylated hydroxynitrile lyase isozyme 5 mutant L331A from Prunus communis complexed with 2-methyl-4H-benzo[d][1,3]dioxine-6-carbaldehyde
ChainA
Resolution1.6 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FQ9 A A331 S333 H358 A329 S331 H356
BS02 FAD A G33 T36 E55 R56 A100 G105 T106 N110 A111 V113 V217 A258 W459 H460 A488 H498 P499 Q500 G36 T39 E58 R59 A103 G108 T109 N113 A114 V116 V220 A256 W453 H454 A482 H492 P493 Q494
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