Structure of PDB 8jjq Chain A

Receptor sequence
>8jjqA (length=320) Species: 34073 (Variovorax paradoxus) [Search protein sequence]
NPSLVIVSPALPGANNGNWRTAQRWKALLSPVCSARVVQQWPDADASADT
VMLALHARRSAESIAHWAHAHPGRGLGVVLTGTDLYQDIGSDPQAQRSLQ
LAQRLVVLQALGAEALPPECRAKARVVYQSTSARAELPKSARQLRAVMVG
HLRQVKSPQTLFDAARLLCGREDIRIDHIGDAGDAGLGELARALASDCPG
YRWLGALPHAQTRQRIQRAHVLVHTSALEGGAHVIMEAVRSGTPVLASRV
PGNVGMLGNDYAGYFPHGDAAALAALLEACRAGQAGLLDSLRTQCALRAP
LFDPRAEQAALFQLLNELQP
3D structure
PDB8jjq Structure of SenB in complex with UDP-GalNAc at 1.64 Angstroms resolution
ChainA
Resolution1.64 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UD2 A N17 G19 N20 R22 T23 T83 H153 K158 I181 A208 L209 H211 T214 E231 G232 G233 H235 V236 E239 N15 G17 N18 R20 T21 T81 H151 K156 I179 A206 L207 H209 T212 E229 G230 G231 H233 V234 E237
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Tue Dec 3 03:07:17 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8jjq', asym_id = 'A', title = 'Structure of SenB in complex with UDP-GalNAc at 1.64 Angstroms resolution'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8jjq', asym_id='A', title='Structure of SenB in complex with UDP-GalNAc at 1.64 Angstroms resolution')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0016757', uniprot = '', pdbid = '8jjq', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016757', uniprot='', pdbid='8jjq', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>