Structure of PDB 8j3y Chain A

Receptor sequence

>8j3yA (length=392) Species: 203122 (Saccharophagus degradans 2-40) [Search protein sequence]

HMAQDMRSEKRGLAYGYHSENDLKAMQGKVKWWYNWDTQADANVKENYAS
YGYDFVPMAWDENFNEEALRSFLDNHPDVKYLLGWNQPNFMEQANLTPAE
AAAHWPVLEAIAQDYNLKLVAPAVNYSPGNVDIPGTDDDYDPWLYLDAFF
EACEGCQVDYIAVHCYMKYESAFSWYVGEFERYNKPIWVTEWAGWDDGGP
ANMGEQMNFLSDTVRWMESNDNIYRYSWFLGRSSEGYDQFPYLDVLLADG
ELTPLGSVYTSIPSNDFRYKIPARIEAEGAHSLTGFKHLATTDTTGLAKL
IAASNEVAEYKLNVEEGGDYTLALRLASSANSDIAIRVDGLLVYTFEDIN
TGGVEAWMTFSSTPISLTAGDHILRVESKSSRFGFNWLELTN

3D structure

PDB

8j3y Structural insights into CBM6E from Saccharophagus degradans

Chain

Resolution

1.28 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	BGC	A	M248 Y250 A253	M167 Y169 A172
BS02	BGC	A	Y207 D277	Y126 D196
BS03	BGC	A	F171 N206 Y207 S208 D277	F90 N125 Y126 S127 D196
BS04	BGC	A	Q168 F171 Y247	Q87 F90 Y166
BS05	BGC	A	Q168 H245 E272 W276	Q87 H164 E191 W195
BS06	BGC	A	W117 W141	W36 W60
BS07	BGC	A	W117 D118 W141	W36 D37 W60
BS08	BGC	A	W141 D142 F145	W60 D61 F64
BS09	MG	A	E357 E359 A379 N467	E276 E278 A298 N386

Gene Ontology

	Molecular Function
GO:0030246	carbohydrate binding

View graph for
Molecular Function

External links

PDB	RCSB:8j3y, PDBe:8j3y, PDBj:8j3y
PDBsum	8j3y
PubMed
UniProt	Q21KS2

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