Structure of PDB 8ikx Chain A

Receptor sequence
>8ikxA (length=390) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
GTINVLDHGAKGDGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLVGPV
SFLGKECKEKIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKG
IIDGRGSVWWNDMMGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQTHLK
FDNCISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISI
QTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNG
VRIKSWQGGSGSVKQVMFSNIQVSNVANPIIIDQYYCDGGGCHNETSAVA
VSNINYINIKGTYTKEPVRFACSDSLPCTGISLSTIELKPATGKASSLDP
FCWKAHGELKTKTLPPIQCLKTEKSPEAASRSNNDACHHH
3D structure
PDB8ikx A plant mechanism of hijacking pathogen virulence factors to trigger innate immunity.
ChainA
Resolution1.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN A F399 C400 C417 F351 C352 C369
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004650 polygalacturonase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0016829 lyase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0009827 plant-type cell wall modification
Cellular Component
GO:0009505 plant-type cell wall

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ikx, PDBe:8ikx, PDBj:8ikx
PDBsum8ikx
PubMed38359129
UniProtQ9LYJ5

[Back to BioLiP]