Structure of PDB 8ik8 Chain A

Receptor sequence
>8ik8A (length=158) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWF
AFLGEGQEASNGIYPVIFYYKDFDELVLAYGISDTNEPHAQWQFSSDIPK
TIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKL
IFNSGKSV
3D structure
PDB8ik8 Structural basis of target recognition by the DNA binding domain of McrBC
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.21.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna A S38 G40 Y41 N43 T45 W49 A59 S60 Y64 S83 D84 T85 K116 Y117 S38 G40 Y41 N43 T45 W49 A59 S60 Y64 S83 D84 T85 K116 Y117
BS02 dna A S20 Q21 S22 K24 Y41 G42 N43 S20 Q21 S22 K24 Y41 G42 N43
External links
PDB RCSB:8ik8, PDBe:8ik8, PDBj:8ik8
PDBsum8ik8
PubMed
UniProtP15005|MCRB_ECOLI Type IV methyl-directed restriction enzyme EcoKMcrB subunit (Gene Name=mcrB)

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