Structure of PDB 8ijy Chain A

Receptor sequence

>8ijyA (length=501) Species: 1140 (Synechococcus elongatus PCC 7942 = FACHB-805) [Search protein sequence]

TVGIWILGDQLTLQHPALSSRAVDQSQTRILLVESLEHAQRRPYHRQKLV
LLWSAMRHFADELRSQGWTVDYVEQADSFQTAVSAWCQQYQIAELQVMEP
ADRSFRAIISSLELTSSLHWLSNCQFLWSTAEFTAWAKPYRQLRLENFYR
EGRKRWQVLLTEDQEPIGGQWNFDPENRKPPKTGLQPPPAAHFLPDAITQ
TVIETVRSLELPLYGKLEPFHWPVTRSQALEALDQFLTVKLKTFGPYQDA
MVSGQATMWHSLIAPALNLGLLHPLEVIRQTEQAFHNNQAPIASVEGFIR
QILGWREYMYGLHHYFPDTYGQSNWFEHDRPLPEFFWTGQTDLHCLQQCF
QQIEAIGYSHHIQRLMILANFALIAGLDPWAVKEWFQATHLDAYDWVMET
NVLGMGLFADGGKLASKPYAASANYINRMSNYCQNCRYDPKQRLGDRACP
FNALYWDFLDRHEQKLQAQGRMGLILKQLQKLPDSDRAAIRDQAAHWQAS
W

3D structure

PDB

8ijy Synechococcus elongatus 6-4 photolyase with an 8-HDF as the antenna chromophore and a covalently linked FAD as the catalytic cofactor

Chain

Resolution

2.38 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	SF4	A	L344 C346 I427 Y433 C434 C437 C450 F452	L343 C345 I426 Y432 C433 C436 C449 F451
BS02	HDF	A	G9 D10 V34 E35 H39 Y45 K49 L53 F80 P101 D103 F106	G8 D9 V33 E34 H38 Y44 K48 L52 F79 P100 D102 F105
BS03	FAD	A	F245 H261 S262 L263 I264 A265 Q302 I303 W306 R307 M310 Y359 H362 R365 F387 D393 A394 V398 M399 N402	F244 H260 S261 L262 I263 A264 Q301 I302 W305 R306 M309 Y358 H361 R364 F386 D392 A393 V397 M398 N401

External links

PDB	RCSB:8ijy, PDBe:8ijy, PDBj:8ijy
PDBsum	8ijy
PubMed
UniProt	Q31P18

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