Structure of PDB 8i4d Chain A

Receptor sequence
>8i4dA (length=419) Species: 5507 (Fusarium oxysporum) [Search protein sequence]
LTVKSTKQWTIGTDVQGSERLNGVSYQEDALITYGDYQYVTFYETAPAGY
LNHFVKVGRRRVSPSVGDWEFLTLDDYTQKTMDGHNMISMGISGDGKIHL
SFDHHDVPINYRISKNGIAKDVPSKWTSDLFDPVVHELVGSQGPYSPLTY
PRFEPLGNGDLLLEFRIGQSGSGDSYIHRYSASTGKWQAYGMYIQGDDNN
AYINGLDYLDGKLYTSWTVRETPNADTNHGVYFAYSNDDGKTWFNTNDTK
LTKPISTSDDSTLIWDIPQNSRMVNQEGQLIDTKGRFHILMRDLLSGEHQ
YQHYLRKADGTWTKNAINPAGLNGPDLYDPRGKLAGDASGEYLFGILPDP
VKQSTGIYVATASKDFKDWKSLAEIPNTSTEPLFDKTRLHESGILSVFVR
QAGGFPDRKLQVWDFELDL
3D structure
PDB8i4d Charge neutralization and beta-elimination cleavage mechanism of family 42 L-rhamnose-alpha-1,4-D-glucuronate lyase revealed using neutron crystallography
ChainA
Resolution1.06 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.2.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN A W265 D266 W265 D266
BS02 MAN A W265 D266 L295 K314 W265 D266 L295 K314
BS03 RAM A Y26 H85 Y150 N275 Q276 R331 Y26 H85 Y150 N275 Q276 R331
BS04 ACT A H85 H105 Y150 R166 S170 Y202 H85 H105 Y150 R166 S170 Y202
BS05 CA A E28 E154 L206 E28 E154 L206
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8i4d, PDBe:8i4d, PDBj:8i4d
PDBsum8i4d
PubMed38382672
UniProtA0A8J0PCK3

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