Structure of PDB 8hxy Chain A

Receptor sequence
>8hxyA (length=102) Species: 8355 (Xenopus laevis) [Search protein sequence]
GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL
RFQSSAVMALQEASEAYLVALFEDTNLAAIHAKRVTIMPKDIQLARRIRG
ER
3D structure
PDB8hxy Structure of histone deacetylase complex Rpd3S bound to nucleosome
ChainA
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R40 Y41 G44 V46 A47 R49 L65 R69 R83 R8 Y9 G12 V14 A15 R17 L33 R37 R51
BS02 dna A K37 R40 Y41 R42 T45 R63 R83 F84 Q85 R116 V117 T118 K5 R8 Y9 R10 T13 R31 R51 F52 Q53 R84 V85 T86
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8hxy, PDBe:8hxy, PDBj:8hxy
PDBsum8hxy
PubMed37798513
UniProtP84233|H32_XENLA Histone H3.2

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