Structure of PDB 8hqv Chain A

Receptor sequence
>8hqvA (length=300) Species: 307796 (Saccharomyces cerevisiae YJM789) [Search protein sequence]
KLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI
QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR
SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK
DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM
ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT
LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG
3D structure
PDB8hqv Tighter ER retention of SARS-CoV-2 Omicron spike caused by a constellation of folding disruptive mutations
ChainA
Resolution1.398 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A R15 K17 Y33 R59 D98 Y99 R101 D117 F142 L161 D206 R272 R14 K16 Y32 R58 D97 Y98 R100 D116 F141 L160 D205 R271
External links
PDB RCSB:8hqv, PDBe:8hqv, PDBj:8hqv
PDBsum8hqv
PubMed
UniProtP41811|COPB2_YEAST Coatomer subunit beta' (Gene Name=SEC27)

[Back to BioLiP]