Structure of PDB 8hqt Chain A

Receptor sequence
>8hqtA (length=295) Species: 307796 (Saccharomyces cerevisiae YJM789) [Search protein sequence]
KLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI
QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR
SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK
DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM
ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT
LKIWNSSTYKVEKTLNVGLERSWCIATHNYIASGFDNGFTVLSLG
3D structure
PDB8hqt Tighter ER retention of SARS-CoV-2 Omicron spike caused by a constellation of folding disruptive mutations
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A R15 K17 Y33 R59 D98 Y99 R101 D117 F142 M144 N188 D206 W274 R14 K16 Y32 R58 D97 Y98 R100 D116 F141 M143 N187 D205 W273
External links
PDB RCSB:8hqt, PDBe:8hqt, PDBj:8hqt
PDBsum8hqt
PubMed
UniProtP41811|COPB2_YEAST Coatomer subunit beta' (Gene Name=SEC27)

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