Structure of PDB 8hlv Chain A

Receptor sequence
>8hlvA (length=223) Species: 325651 (Bryopsis corticulans) [Search protein sequence]
VEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANR
ELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLD
YLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAF
DPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAE
HIADPVANNGFVYATKFFGAQIF
3D structure
PDB8hlv Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
ChainA
Resolution2.55 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 0UR A M61 T64 F150 D151 P152 M153 A179 F183 Q186 P194 M61 T64 F150 D151 P152 M153 A179 F183 Q186 P194
BS02 0IE A W34 D35 S36 A37 W59 A60 G63 G66 C67 W86 M177 W34 D35 S36 A37 W59 A60 G63 G66 C67 W86 M177
BS03 0IE A G210 F211 A214 K216 F217 F218 G210 F211 A214 K216 F217 F218
BS04 CHL A L10 W11 L12 G13 P14 Y32 W34 L10 W11 L12 G13 P14 Y32 W34
BS05 CHL A G30 D31 Y32 W34 D35 L39 S40 N49 R50 E53 R174 M177 F178 F181 G30 D31 Y32 W34 D35 L39 S40 N49 R50 E53 R174 M177 F178 F181
BS06 CLA A L52 H56 L52 H56
BS07 CLA A L62 V65 G66 F81 Q92 Y101 L102 L62 V65 G66 F81 Q92 Y101 L102
BS08 CHL A S106 L107 V108 H109 A110 Q111 S112 S106 L107 V108 H109 A110 Q111 S112
BS09 CHL A W59 V108 I116 Q120 W59 V108 I116 Q120
BS10 CHL A F87 G90 S91 F94 Q120 F184 F87 G90 S91 F94 Q120 F184
BS11 CHL A R58 W59 Y130 R131 G135 P136 L137 G138 E139 P146 F150 P152 R58 W59 Y130 R131 G135 P136 L137 G138 E139 P146 F150 P152
BS12 CHL A E51 L52 I55 H56 W59 Q120 M124 G125 E128 R131 E51 L52 I55 H56 W59 Q120 M124 G125 E128 R131
BS13 CLA A R58 M61 Y145 P146 G147 F150 D151 M155 A156 F162 L165 K166 E169 N172 R58 M61 Y145 P146 G147 F150 D151 M155 A156 F162 L165 K166 E169 N172
BS14 CLA A K168 K171 N172 L175 K168 K171 N172 L175
BS15 CLA A K168 N172 L175 K168 N172 L175
BS16 CLA A F178 A179 F181 G182 V185 Q186 T190 C197 H201 N208 N209 G210 F178 A179 F181 G182 V185 Q186 T190 C197 H201 N208 N209 G210
BS17 CHL A W198 H201 P205 W198 H201 P205
BS18 0IE A C117 V121 C117 V121
BS19 CHL A L114 W118 L114 W118
BS20 CHL A A214 T215 F217 F223 A214 T215 F217 F223
BS21 CHL A W11 W34 S36 W11 W34 S36
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Fri Nov 15 20:41:12 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8hlv', asym_id = 'A', title = 'Structural and functional properties of differen...m an intertidal green alga Bryopsis corticulans. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8hlv', asym_id='A', title='Structural and functional properties of differen...m an intertidal green alga Bryopsis corticulans. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0009765,0016020', uniprot = '', pdbid = '8hlv', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009765,0016020', uniprot='', pdbid='8hlv', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>