Structure of PDB 8him Chain A

Receptor sequence
>8himA (length=848) Species: 3712 (Brassica oleracea) [Search protein sequence]
GFSSRSVITGDAFRNVNEVGIPMEIAHRITFEERVSVHNIGYLQELVDNK
MCLSYTQGSTTYSLRTVLKPGQIVHRRVMDGDVVFINRPPTTHKHSLQAL
RVYVHEDNTVKINPLMCGPLSADFDGDCVHLFYPQSLTAKAEVLELFSVD
KQLRSSHTGQLILQLGLDSLLSLRVMMEQVFLDKASAQQLAMYGSRSLPS
PAVVKSSKSGPAWTFFQILQLAFPERLSCRGDGFIVGGSDLLSFDFGVDA
LASIINGIVTGIMVEKGPKEALAFFDSLQPLLMEHLDPQGFSLSLEDLSM
SREDMGVIHNLIVREISPMVSRLRLSYEDELQLENSIQKVKEVAANFMLK
SYSMRNLIDIKSNSAINKLVQQIGFLGLQLSDKKKLYTKTLVEDMAQFYK
KKYVSTSSSGDFGIVKGCFFHGLDPYEEMAHSVAAREVIVRSSRGLAEPG
TLFKNLMAVLRDIVITNDGTVRNTCSNSIVQFKYELSSDNENQGLFEAGD
PVGVLAATAMSNPAYKAVLDSSPNSNSSWELMKEVLLCKVNFQNTTNDRR
VILYLNECRCGKKYCQENSAYTVRNKLKKVSLKDTAVEFLVEYRICLHGH
IHLNKTLLEGWNISMQDILQRCEDAINSLVQKKKKKAEDFKKMNLSVSEC
CSFRGPGSSKDSDMPCLMFSSYNATDPDLERTLDVLCNTIYPVLLETVIK
GDPRIASANIIWNSPETTTWIRSLHASRRGEWVLDVTVEKSDVKQSGDAW
RVVIDSCLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAVQRLSASVRK
VSKGVLKEHIILVANNMTCSGDMLGFNYGGYKALTRSLTGSQFELLWN
3D structure
PDB8him Structure and mechanism of the plant RNA polymerase V.
ChainA
Resolution2.8 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A S769 L772 A773 S443 L446 A447
BS02 rna A T417 T418 T91 T92
BS03 MG A D449 D451 D453 D123 D125 D127
BS04 ZN A H938 H940 C989 C1004 H600 H602 C651 C666
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 30 13:43:03 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8him', asym_id = 'A', title = 'Structure and mechanism of the plant RNA polymerase V.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8him', asym_id='A', title='Structure and mechanism of the plant RNA polymerase V.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003677,0003899,0006351', uniprot = '', pdbid = '8him', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0003899,0006351', uniprot='', pdbid='8him', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>