Structure of PDB 8hil Chain A

Receptor sequence
>8hilA (length=860) Species: 3712 (Brassica oleracea) [Search protein sequence]
SGFSSRSVITGDAFRNVNEVGIPMEIAHRITFEERVSVHNIGYLQELVDN
KMCLSYTQGSTTYSLRDGSKGHTVLKPGQIVHRRVMDGDVVFINRPPTTH
KHSLQALRVYVHEDNTVKINPLMCGPLSADFDGDCVHLFYPQSLTAKAEV
LELFSVDKQLRSSHTGQLILQLGLDSLLSLRVMMEQVFLDKASAQQLAMY
GSRSLPSPAVVKSSKSGPAWTFFQILQLAFPERLSCRGDGFIVGGSDLLS
FDFGVDALASIINGIVTGIMVEKGPKEALAFFDSLQPLLMEHLDPQGFSL
SLEDLSMSREDMGVIHNLIVREISPMVSRLRLSYEDELQLENSIQKVKEV
AANFMLKSYSMRNLIDIKSNSAINKLVQQIGFLGLQLSDKKKLYTKTLVE
DMAQFYKKKYVSTSSSGDFGIVKGCFFHGLDPYEEMAHSVAAREVIVRSS
RGLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSNSIVQFKYELSSDNENQ
GLFEAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWELMKEVLLCKVNFQ
NTTNDRRVILYLNECRCGKKYCQENSAYTVRNKLKKVSLKDTAVEFLVEY
RKQQAISEIFGMDICLHGHIHLNKTLLEGWNISMQDILQRCEDAINSLVQ
KKKKKAEDFKKMNLSVSECCSFRGPGSSKDSDMPCLMFSSYNATDPDLER
TLDVLCNTIYPVLLETVIKGDPRIASANIIWNSPETTTWIRSLHASRRGE
WVLDVTVEKSDVKQSGDAWRVVIDSCLSVLHLIDTKRSIPYSIKQVQELL
GLSCAFEQAVQRLSASVRKVSKGVLKEHIILVANNMTCSGDMLGFNSGGY
KASQFELLWN
3D structure
PDB8hil Structure and mechanism of the plant RNA polymerase V.
ChainA
Resolution3.57 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A H938 H940 P1003 H619 H621 P684
BS02 MG A D449 F450 G452 D453 D130 F131 G133 D134
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 30 13:51:47 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8hil', asym_id = 'A', title = 'Structure and mechanism of the plant RNA polymerase V.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8hil', asym_id='A', title='Structure and mechanism of the plant RNA polymerase V.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003677,0003899,0006351', uniprot = '', pdbid = '8hil', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0003899,0006351', uniprot='', pdbid='8hil', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>