Structure of PDB 8h97 Chain A

Receptor sequence
>8h97A (length=619) [Search protein sequence]
SQAKVSVNLNVKHVVGGISEFDRTKYITIHANQIENEWDGDNFTSDLRDH
FLNGFDVYLGRDTGGITWNLNNMQEDASRPGFANPSNIISKGINTRNNYA
SKTHLHVYENRKSNHVVAAQLHPFWTGESQIATKGTGWELASPTATGEYM
GRYFNEFYGGNGEPVPSWIEVINEPAYEALGGKKNFTNSLQEIADFHVEV
ADAIRVQNPNLKIGGYTAAFPDFETGDFQRWINRDKLFIDVAGEKMDFWS
WHLYDFPVIGGKEDIRSGSNVEATFDMHDHYSMLKLGHKKPYVISEYGAQ
THDFRNEGWSSYRDWLFVRAQNSLMMSFMERPEDIAMAIPFTIVKAEWGF
NTDKNLPYPARLMRKANEPESYTGEWVYTDRVKFYDLWKNVKGTRIDTKS
TDLDIQVDAYVDGNKGYLILNNLESEETEITLDVFEKYDSSITNILKRHL
TLSSNNVVIEEETFSSSISTVQLGAGSTMILEYTFANSLTIDETSTEEKY
YADSYLQPIVASQPILFAVNNVVKSATYGEAVLRLGLGRDHGKSLKPIVK
VNNTEVVVPDDWRGYDQADKGRFFGTIEIPVSYDLLTTNNTVSVEFPDSS
GHVSSVIMQVFNFSSDIRT
3D structure
PDB8h97 Structural characterization on a beta-agarase Aga86A_Wa from Wenyingzhuangia aestuarii reveals the prevalent methyl-galactose accommodation capacity of GH86 enzymes at subsite -1.
ChainA
Resolution2.194 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.81: beta-agarase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A D430 D587 W588 G590 D404 D561 W562 G564
BS02 CA A D428 D430 D587 D402 D404 D561
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0033916 beta-agarase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8h97, PDBe:8h97, PDBj:8h97
PDBsum8h97
PubMed36746585
UniProtA0A516RTC5

[Back to BioLiP]