Structure of PDB 8h1r Chain A

Receptor sequence

>8h1rA (length=736) Species: 208964 (Pseudomonas aeruginosa PAO1) [Search protein sequence]

ATLAGDVVLMQVEGDEANLHQLENRGELVGNVKLRDKGMLVVGDHAQVQL
DNGEAQVDNAEYVIHKAHARGSALYAKRSENAIIMLKDGTYTRCEPSSNA
WTLKGNNVKLNPATGFGTATNATLRVKDFPVFYTPYIYFPIDDRRQSGFL
PPSFSSTSDTGFTLVTPYYFNLAPNYDATLYPRYMAKRGMMLEGEFRYLT
HSSEGIVNAAYLNDKDDHREGFPDYSKDRWLYGLKNTTGLDSRWLAEVDY
TRISDPYYFQDLDTDLGVGSTTYVNQRGTLTYRGDTFTGRLNAQAYQLAT
TTDVTPYDRLPQITFDGFLPYNPGGMQFTYGTEFVRFDRDLDENIYFNDD
GSIRGKRPDASLQGLARATGDRMHLEPGMSLPMTRSWGYVTPTLKYLYTK
YDLDLDSQGKTDLNKRDESFDSNQDRSLPLVKVDSGLYFDRDTTFAGTPF
RQTLEPRAMYLYVPYKDQDSLPVFDTSEPSFSYDSLWRENRFTGKDRIGD
ANQLSLGVTSRFIEENGFERASISAGQIYYFRDRRVQLPGLTEKDLKRLN
LDLDNDSWRSPYAFAGQYRFNRDWRINSDFNWNPNTSRTESGSAIFHYQP
EVDPGKVVNVGYRYRADARRFDSSRGTFRYGNENDIIKQHDFSVIWPLVP
QWSVLARWQYDYNKNRTLEAFGGFEYDSCCWKLRLINRYWLDVDDDAFLV
QSEKADRGIFLQIVLKGLGGIVGEMFLDKGIQGYRQ

3D structure

PDB

8h1r Lipoprotein sorting to the cell surface via a crosstalk between the Lpt and Lol pathways during outer membrane biogenesis

Chain

Resolution

2.98 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	D319 R320 R321 Q322 S323 G324 F325 L326 Y345 P350 N351 Y352 T355 E371 R373 Y374 L375 T376 G898 G899 V901	D143 R144 R145 Q146 S147 G148 F149 L150 Y169 P174 N175 Y176 T179 E195 R197 Y198 L199 T200 G719 G720 V722
BS02	PCJ	A	F305 I313 Y314 F325 P328 T342 L897	F129 I137 Y138 F149 P152 T166 L718

Gene Ontology

	Biological Process
GO:0015920	lipopolysaccharide transport
GO:0043165	Gram-negative-bacterium-type cell outer membrane assembly
GO:0061024	membrane organization

	Cellular Component
GO:0009279	cell outer membrane
GO:0019867	outer membrane

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:8h1r, PDBe:8h1r, PDBj:8h1r
PDBsum	8h1r
PubMed
UniProt	Q9I5U2\|LPTD_PSEAE LPS-assembly protein LptD (Gene Name=lptD)

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